The Cancer Genome Atlas

GPTKB entity

Statements (58)
Predicate Object
gptkbp:instanceOf research
gptkbp:abbreviation gptkb:TCGA
gptkbp:country gptkb:United_States
gptkbp:dataSource gptkb:Genomic_Data_Commons
gptkbp:endDate 2017
gptkbp:field cancer research
bioinformatics
cancer genomics
gptkbp:fundedBy gptkb:National_Cancer_Institute
gptkb:National_Human_Genome_Research_Institute
gptkbp:goal catalog genetic mutations responsible for cancer
https://www.w3.org/2000/01/rdf-schema#label The Cancer Genome Atlas
gptkbp:impact contributed to precision medicine
enabled large-scale cancer genomics studies
provided open-access data to researchers
gptkbp:numberOfSamples over 11,000 patients
gptkbp:publishedIn gptkb:Comprehensive_molecular_portraits_of_human_breast_tumours_(Nature,_2012)
gptkb:Integrated_genomic_analyses_of_ovarian_carcinoma_(Nature,_2011)
The Cancer Genome Atlas Pan-Cancer analysis project (Nature Genetics, 2013)
gptkbp:relatedTo gptkb:International_Cancer_Genome_Consortium
gptkb:Pan-Cancer_Analysis_of_Whole_Genomes
gptkbp:startDate 2006
gptkbp:status completed
gptkbp:studiedCancerType gptkb:cancer
gptkb:acute_myeloid_leukemia
gptkb:glioblastoma
gptkb:rhabdomyosarcoma
esophageal cancer
liver cancer
melanoma
mesothelioma
pancreatic cancer
prostate cancer
stomach cancer
uterine cancer
testicular cancer
colon cancer
bladder cancer
adrenocortical carcinoma
cholangiocarcinoma
diffuse large B-cell lymphoma
head and neck cancer
kidney cancer
kidney chromophobe
kidney renal clear cell carcinoma
kidney renal papillary cell carcinoma
low grade glioma
pheochromocytoma and paraganglioma
rectal cancer
thymoma
gptkbp:type clinical data
epigenomic data
genomic data
proteomic data
transcriptomic data
gptkbp:website https://www.cancer.gov/about-nci/organization/ccg/research/structural-genomics/tcga
gptkbp:bfsParent gptkb:Broad_Institute
gptkbp:bfsLayer 3