Statements (47)
| Predicate | Object |
|---|---|
| gptkbp:instance_of |
gptkb:software
|
| gptkbp:bfsLayer |
5
|
| gptkbp:bfsParent |
gptkb:Illumina_Infinium_Array
gptkb:The_Broad_Institute_of_MIT_and_Harvard |
| gptkbp:developed_by |
gptkb:Broad_Institute
|
| gptkbp:first_released |
gptkb:2010
|
| gptkbp:game_components |
Mutect2
Add Or Replace Read Groups Apply BQSR Base Recalibrator Collect Alignment Summary Metrics Collect Gc Bias Metrics Collect Insert Size Metrics Collect Quality Yield Metrics Collect Rna Seq Metrics Collect Targeted Pcr Metrics Collect Variant Calling Metrics Collect Wgs Metrics Combine GVC Fs Create Sequence Dictionary Fix Misencoded Bam Gather BQSR Reports Genotype GVC Fs Haplotype Caller Index Bam Index Bed Index Feature File Index Gff Index Gvcf Index Vcf Mark Duplicates Merge Sam Files Print Variants Reorder Sam Select Variants Sort Sam Split N Cigar Reads Validate Sam File Variant Filtration |
| https://www.w3.org/2000/01/rdf-schema#label |
GATK
|
| gptkbp:is_used_for |
genomic analysis
|
| gptkbp:language |
gptkb:Java
|
| gptkbp:latest_version |
4.2.0.0
|
| gptkbp:license |
Apache License 2.0
|
| gptkbp:supports |
genome assembly
variant discovery genome variant calling |