Statements (67)
| Predicate | Object |
|---|---|
| gptkbp:instance_of |
gptkb:document
|
| gptkbp:analyzes |
bioinformatics visualization tools
|
| gptkbp:can_be_compressed_using |
gzip
|
| gptkbp:can_include |
adapter sequences
|
| gptkbp:can_transform_into |
FASTA format
|
| gptkbp:contains |
sequence reads
quality scores |
| gptkbp:developed_by |
gptkb:Illumina
|
| https://www.w3.org/2000/01/rdf-schema#label |
FASTQ
|
| gptkbp:is_a_key_component_of |
NGS workflows
|
| gptkbp:is_a_standard_format_for |
high-throughput sequencing data
|
| gptkbp:is_a_text-based_format |
nan
|
| gptkbp:is_analyzed_in |
gptkb:National_Institutes_of_Health
sequence quality |
| gptkbp:is_associated_with |
high-throughput data analysis
|
| gptkbp:is_characterized_by |
four lines per sequence
|
| gptkbp:is_essential_for |
sequence alignment
variant calling |
| gptkbp:is_often_accompanied_by |
BAM files
|
| gptkbp:is_often_converted_to |
BAM or SAM format
|
| gptkbp:is_often_generated_by |
sequencing machines
|
| gptkbp:is_often_processed_by |
alignment algorithms
|
| gptkbp:is_often_used_in |
bioinformatics tools
genomics |
| gptkbp:is_part_of |
data preprocessing pipeline
|
| gptkbp:is_related_to |
DNA sequencing
RNA sequencing |
| gptkbp:is_used_in |
gptkb:biotechnology
clinical trials biomedical research comparative genomics conservation genetics evolutionary biology whole genome sequencing biotechnology applications functional genomics pharmacogenomics genetic mapping vaccine development gene expression analysis transcriptomics genome annotation genome assembly metagenomics epigenomics pathogen detection disease outbreak tracking targeted sequencing clinical genomics environmental genomics genetic diversity studies single-cell sequencing agricultural genomics population genomics exome sequencing gene discovery microbiome studies genome comparison forensic genomics metatranscriptomics genome editing research |
| gptkbp:storage |
raw sequencing data
|
| gptkbp:supports |
multiple sequence formats
|
| gptkbp:used_for |
storing biological sequence data
|
| gptkbp:used_in |
next-generation sequencing
|
| gptkbp:bfsParent |
gptkb:NVIDIA_Clara_Parabricks
|
| gptkbp:bfsLayer |
5
|