Properties (63)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
file format
|
| gptkbp:availableFormats |
.fastq
|
| gptkbp:compressionRatio |
using gzip
|
| gptkbp:contains |
sequence reads
quality scores |
| gptkbp:evaluates |
sequence quality
|
| gptkbp:format |
for storing sequences
|
| https://www.w3.org/2000/01/rdf-schema#label |
FASTQ
|
| gptkbp:includes |
metadata
|
| gptkbp:introduced |
2008
|
| gptkbp:is_essential_for |
bioinformatics analysis
|
| gptkbp:is_part_of |
the_NGS_workflow
|
| gptkbp:is_popular_among |
sequencing machines
|
| gptkbp:is_promoted_through |
various bioinformatics tools
|
| gptkbp:is_used_in |
genomics research
next-generation sequencing variant calling pharmacogenomics phylogenetics genome assembly cancer genomics metagenomics studies targeted sequencing clinical genomics environmental genomics single-cell sequencing agricultural genomics population genomics exome sequencing to study evolutionary relationships microbiome studies DNA-Seq experiments RNA-Seq experiments epigenomics studies forensic genomics metatranscriptomics storing biological sequence data to analyze alternative splicing to analyze genetic diversity to analyze protein-RNA interactions to assess chromatin accessibility to assess population structure to explore gene regulatory networks to explore genetic architecture to identify mutations to investigate developmental biology. to investigate epigenetic modifications to investigate gene function to monitor disease outbreaks to perform genome-wide association studies (GWAS) to study cellular heterogeneity to study gene expression to study host-pathogen interactions to study non-coding RNAs to study protein-DNA interactions to track pathogen evolution transcriptome analysis veterinary genomics to_conduct_transcriptome-wide_association_studies_(TWAS) |
| gptkbp:produces |
gptkb:Evan_Bolotin
|
| gptkbp:related_to |
FASTA format
|
| gptkbp:supports |
multiple sequences per file
|
| gptkbp:transferFee |
BAM format
|