UniProt Knowledgebase
E740471
automatically annotated protein sequence database
bioinformatics resource
biological database
curated database
manually curated protein sequence database
protein information resource
scientific consortium
UniProt Knowledgebase is a comprehensive, curated database that provides detailed information on protein sequences and their functional annotations across numerous species.
All labels observed (1)
| Label | Occurrences |
|---|---|
| UniProt Knowledgebase canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T8482731 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: UniProt Knowledgebase Context triple: [UniProt protein sequences, partOf, UniProt Knowledgebase]
-
A.
UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot is the manually curated, high-quality section of the UniProt Knowledgebase that provides reviewed protein sequence and functional annotation data.
-
B.
UniProtKB/TrEMBL
UniProtKB/TrEMBL is a computationally annotated section of the UniProt Knowledgebase that contains large-scale, unreviewed protein sequence records awaiting expert curation.
-
C.
Protein Information Resource
Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
-
D.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
E.
UniProt Consortium
The UniProt Consortium is an international collaboration of bioinformatics organizations responsible for maintaining and curating the UniProt protein sequence and functional annotation database.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: UniProt Knowledgebase Target entity description: UniProt Knowledgebase is a comprehensive, curated database that provides detailed information on protein sequences and their functional annotations across numerous species.
-
A.
UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot is the manually curated, high-quality section of the UniProt Knowledgebase that provides reviewed protein sequence and functional annotation data.
-
B.
UniProtKB/TrEMBL
UniProtKB/TrEMBL is a computationally annotated section of the UniProt Knowledgebase that contains large-scale, unreviewed protein sequence records awaiting expert curation.
-
C.
Protein Information Resource
Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
-
D.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
E.
UniProt Consortium
The UniProt Consortium is an international collaboration of bioinformatics organizations responsible for maintaining and curating the UniProt protein sequence and functional annotation database.
- F. None of above. chosen
Statements (47)
| Predicate | Object |
|---|---|
| instanceOf |
automatically annotated protein sequence database
ⓘ
bioinformatics resource ⓘ biological database ⓘ curated database ⓘ manually curated protein sequence database ⓘ protein information resource ⓘ scientific consortium ⓘ |
| access |
freely available
ⓘ
online ⓘ |
| covers | multiple species ⓘ |
| dataType |
protein annotation
ⓘ
protein sequence ⓘ |
| field |
bioinformatics
ⓘ
molecular biology ⓘ proteomics ⓘ |
| hasFeature |
Gene Ontology annotation
NERFINISHED
ⓘ
enzyme and pathway annotation ⓘ post-translational modification annotation ⓘ protein domain annotation ⓘ protein function annotation ⓘ protein-protein interaction information ⓘ reviewed entries ⓘ sequence variants annotation ⓘ subcellular location annotation ⓘ taxonomic information ⓘ unreviewed entries ⓘ |
| hasIdentifier | UniProt accession ⓘ |
| hasPart |
UniProtKB/Swiss-Prot
NERFINISHED
ⓘ
UniProtKB/TrEMBL NERFINISHED ⓘ |
| integratesWith |
Ensembl
NERFINISHED
ⓘ
KEGG NERFINISHED ⓘ NCBI databases NERFINISHED ⓘ PDB NERFINISHED ⓘ Reactome NERFINISHED ⓘ |
| language | English ⓘ |
| maintainedBy | UniProt Consortium NERFINISHED ⓘ |
| partOf | UniProt NERFINISHED ⓘ |
| provides |
cross-references to other databases
ⓘ
functional annotations ⓘ protein sequences ⓘ |
| subjectOf | scientific publications ⓘ |
| supports | programmatic access via APIs ⓘ |
| usedFor |
biomedical research
ⓘ
comparative genomics ⓘ drug target discovery ⓘ protein function prediction ⓘ proteome annotation ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: UniProt Knowledgebase Description of subject: UniProt Knowledgebase is a comprehensive, curated database that provides detailed information on protein sequences and their functional annotations across numerous species.
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.