UniProtKB/Swiss-Prot
E736813
UniProtKB/Swiss-Prot is the manually curated, high-quality section of the UniProt Knowledgebase that provides reviewed protein sequence and functional annotation data.
All labels observed (3)
| Label | Occurrences |
|---|---|
| UniProtKB/Swiss-Prot canonical | 6 |
| Swiss-Prot | 2 |
| SIB Swiss-Prot group | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T8482749 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: UniProtKB/Swiss-Prot Context triple: [UniProt protein sequences, organizedIn, UniProtKB/Swiss-Prot]
-
A.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
B.
Protein database
The Protein database is a curated collection of protein sequences and related functional, structural, and bibliographic information maintained by the National Center for Biotechnology Information (NCBI).
-
C.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
D.
GenBank
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
-
E.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: UniProtKB/Swiss-Prot Target entity description: UniProtKB/Swiss-Prot is the manually curated, high-quality section of the UniProt Knowledgebase that provides reviewed protein sequence and functional annotation data.
-
A.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
B.
Protein database
The Protein database is a curated collection of protein sequences and related functional, structural, and bibliographic information maintained by the National Center for Biotechnology Information (NCBI).
-
C.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
D.
GenBank
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
-
E.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
- F. None of above. chosen
Statements (49)
| Predicate | Object |
|---|---|
| instanceOf |
biological database
ⓘ
protein database ⓘ section of UniProt Knowledgebase ⓘ |
| curationMethod |
expert curation
ⓘ
literature-based curation ⓘ sequence analysis ⓘ |
| dataQuality | reviewed ⓘ |
| differenceDescription | Swiss-Prot entries are manually reviewed while TrEMBL entries are unreviewed and automatically annotated ⓘ |
| differsFrom | UniProtKB/TrEMBL ⓘ |
| focusesOn |
high-quality annotation
ⓘ
non-redundant protein sequences ⓘ |
| hasCounterpart | UniProtKB/TrEMBL ⓘ |
| hasCurationType | manually curated ⓘ |
| hasFeature |
controlled vocabularies
ⓘ
cross-links to 3D structure databases ⓘ cross-links to nucleotide sequence databases ⓘ cross-links to pathway databases ⓘ cross-links to proteomic resources ⓘ evidence-tagged annotations ⓘ stable accession numbers ⓘ |
| hasIdentifierPattern | UniProt accession ⓘ |
| hasLicense | open access for academic use ⓘ |
| language | English ⓘ |
| maintainedBy |
European Bioinformatics Institute
ⓘ
Protein Information Resource ⓘ Swiss Institute of Bioinformatics ⓘ UniProt Consortium ⓘ |
| partOf | UniProt Knowledgebase ⓘ |
| provides |
cross-references to other databases
ⓘ
enzyme classification ⓘ gene names ⓘ literature citations ⓘ post-translational modification annotation ⓘ protein domain annotation ⓘ protein function description ⓘ protein functional annotation ⓘ protein names and synonyms ⓘ protein sequence data ⓘ protein-protein interaction information ⓘ sequence variants annotation ⓘ subcellular location annotation ⓘ taxonomic information ⓘ |
| shortName |
Swiss-Prot
ⓘ
linked to:
UniProtKB/Swiss-Prot
|
| url | https://www.uniprot.org/uniprotkb ⓘ |
| usedFor |
annotation of newly sequenced genomes
ⓘ
bioinformatics analyses ⓘ comparative genomics ⓘ functional characterization of proteins ⓘ proteomics research ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: UniProtKB/Swiss-Prot Description of subject: UniProtKB/Swiss-Prot is the manually curated, high-quality section of the UniProt Knowledgebase that provides reviewed protein sequence and functional annotation data.
Referenced by (9)
Full triples — surface form annotated when it differs from this entity's canonical label.
linked to: UniProtKB/Swiss-Prot
linked to: UniProtKB/Swiss-Prot
linked to: UniProtKB/Swiss-Prot