cBioPortal

GPTKB entity

Statements (50)
Predicate Object
gptkbp:instanceOf gptkb:mobile_application
gptkb:software
gptkbp:API gptkb:REST_API
gptkbp:citation Cerami E, et al. Cancer Discov. 2012;2(5):401-4.
Gao J, et al. Sci Signal. 2013;6(269):pl1.
gptkbp:dataSource public cancer genomics datasets
user-uploaded datasets
gptkbp:developer gptkb:Dana-Farber_Cancer_Institute
gptkb:Memorial_Sloan_Kettering_Cancer_Center
gptkbp:feature gptkb:data_visualization
gptkb:OncoPrint_visualization
gptkb:gene_set_enrichment_analysis
survival analysis
user authentication
downloadable data
data privacy controls
clinical data integration
co-expression analysis
custom query interface
group comparison analysis
mutation mapper
patient-level data exploration
study management
gptkbp:firstReleased 2012
gptkbp:focus cancer genomics
gptkbp:hasType clinical data
DNA methylation data
copy number alteration data
mRNA expression data
mutation data
protein expression data
https://www.w3.org/2000/01/rdf-schema#label cBioPortal
gptkbp:integratesWith gptkb:The_Cancer_Genome_Atlas
gptkb:Genomic_Data_Commons
gptkb:International_Cancer_Genome_Consortium
gptkbp:license gptkb:GNU_Affero_General_Public_License
gptkbp:openSource true
gptkbp:programmingLanguage gptkb:Java
gptkb:JavaScript
gptkb:Python
gptkbp:provides exploratory analysis tools
interactive data visualization
gptkbp:purpose cancer genomics data analysis
gptkbp:supportedBy true
gptkbp:usedBy clinicians
bioinformaticians
cancer researchers
gptkbp:website https://www.cbioportal.org/
gptkbp:bfsParent gptkb:TCGA
gptkbp:bfsLayer 5