gene set enrichment analysis
GPTKB entity
Statements (23)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
bioinformatics method
|
| gptkbp:abbreviation |
gptkb:GSEA
|
| gptkbp:analyzes |
gene sets
|
| gptkbp:contrastsWith |
gene expression profiles
|
| gptkbp:developedBy |
gptkb:Jill_P._Mesirov
gptkb:Aravind_Subramanian |
| https://www.w3.org/2000/01/rdf-schema#label |
gene set enrichment analysis
|
| gptkbp:implementedIn |
gptkb:GSEA_software
R packages |
| gptkbp:input_data |
gene sets
ranked list of genes |
| gptkbp:output |
enrichment score
significance value |
| gptkbp:publicationYear |
2005
|
| gptkbp:publishedIn |
gptkb:Proceedings_of_the_National_Academy_of_Sciences
|
| gptkbp:recognizedBy |
enriched biological pathways
|
| gptkbp:used_in |
cancer research
functional genomics transcriptomics |
| gptkbp:usedFor |
interpreting gene expression data
|
| gptkbp:website |
https://www.gsea-msigdb.org/gsea/index.jsp
|
| gptkbp:bfsParent |
gptkb:cBioPortal
|
| gptkbp:bfsLayer |
6
|