|
gptkbp:instanceOf
|
file format
|
|
gptkbp:abbreviation
|
VCF
|
|
gptkbp:can_be_compressed_with
|
bgzip
|
|
gptkbp:can_be_indexed_with
|
gptkb:tabix
|
|
gptkbp:category
|
genomics data format
|
|
gptkbp:contains
|
data lines
header line
meta-information lines
|
|
gptkbp:developedBy
|
gptkb:1000_Genomes_Project
|
|
gptkbp:fileExtension
|
.vcf
|
|
gptkbp:firstReleased
|
2011
|
|
gptkbp:header_line_prefix
|
#
|
|
https://www.w3.org/2000/01/rdf-schema#label
|
Variant Call Format
|
|
gptkbp:openFormat
|
yes
|
|
gptkbp:relatedTo
|
gptkb:BCF
|
|
gptkbp:specification_version
|
VCFv4.2
VCFv4.3
|
|
gptkbp:specifies
|
https://samtools.github.io/hts-specs/VCFv4.3.pdf
|
|
gptkbp:standardizedBy
|
gptkb:Global_Alliance_for_Genomics_and_Health
|
|
gptkbp:supports
|
insertions and deletions
structural variants
single nucleotide polymorphisms
|
|
gptkbp:text_format
|
tab-delimited
|
|
gptkbp:used_in
|
gptkb:GATK
gptkb:1000_Genomes_Project
gptkb:Ensembl
gptkb:bcftools
bioinformatics
samtools
vcftools
|
|
gptkbp:usedFor
|
storing gene sequence variations
|
|
gptkbp:bfsParent
|
gptkb:VCF_file_format
|
|
gptkbp:bfsLayer
|
8
|