Statements (60)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
software
|
| gptkbp:archives |
https://github.com/samtools/tabix
|
| gptkbp:availableFormats |
BGZF
|
| gptkbp:commanded |
gptkb:tabix
yes |
| gptkbp:compressionRatio |
gzip
|
| gptkbp:dependency |
HTSlib
|
| gptkbp:developedBy |
HTSlib
|
| gptkbp:features |
community support
lightweight open-source command line interface data integrity checks efficient memory usage extensible supports batch processing multi-threaded support supports large datasets supports multiple file formats supports data visualization tools supports remote data access provides error messages can be used in pipelines fast querying indexing of compressed files integrates with other bioinformatics tools output filtering provides community contributions provides data export options provides logging capabilities provides performance benchmarks provides usage examples provides user feedback mechanisms provides version control random access to genomic data region-based querying supports custom queries supports data import options supports data sharing supports indexed files supports integration with R and Python supports user-defined regions supports various output formats provides_API_access |
| gptkbp:hasVersion |
1.13
|
| gptkbp:historicalSignificance |
https://www.htslib.org/doc/tabix.html
|
| https://www.w3.org/2000/01/rdf-schema#label |
tabix
|
| gptkbp:inputOutput |
text files
|
| gptkbp:installation |
package manager
source code compilation |
| gptkbp:language |
C
|
| gptkbp:license |
MIT License
|
| gptkbp:operatingHours |
Unix-like systems
|
| gptkbp:powerOutput |
text files
|
| gptkbp:purpose |
indexing and querying genomic data
|
| gptkbp:releaseDate |
2011
|
| gptkbp:supports |
VCF format
BED format GFF format |
| gptkbp:uses |
bioinformatics
|