bcftools

GPTKB entity

Statements (30)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:citation Li H, Handsaker B, Wysoker A, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009.
gptkbp:commandLineTool yes
gptkbp:developer gptkb:Heng_Li
Samtools team
gptkbp:firstReleased 2011
gptkbp:genre genomics
variant calling
VCF/BCF manipulation
https://www.w3.org/2000/01/rdf-schema#label bcftools
gptkbp:latestReleaseVersion 2023-10-18
1.19
gptkbp:license gptkb:MIT_License
gptkbp:operatingSystem gptkb:Windows
gptkb:macOS
gptkb:Linux
gptkbp:programmingLanguage C
gptkbp:relatedTo samtools
gptkbp:repository https://github.com/samtools/bcftools
gptkbp:supportsFormat gptkb:BCF
VCF
gptkbp:usedFor variant annotation
variant calling
variant filtering
VCF/BCF conversion
genotype likelihoods
statistical analysis of variants
gptkbp:website http://samtools.github.io/bcftools/
gptkbp:bfsParent gptkb:htslib
gptkbp:bfsLayer 7