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gptkbp:instanceOf
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gptkb:software
|
|
gptkbp:availableOn
|
gptkb:GitHub
gptkb:Bioconda
gptkb:SourceForge
|
|
gptkbp:canExtract
|
reads by region
|
|
gptkbp:canFlagstat
|
BAM files
|
|
gptkbp:canMerge
|
BAM files
|
|
gptkbp:canMpileup
|
BAM files
|
|
gptkbp:canSort
|
BAM files
|
|
gptkbp:canStats
|
BAM files
|
|
gptkbp:citation
|
Li H, Handsaker B, Wysoker A, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009.
|
|
gptkbp:convertedTo
|
BAM to CRAM
BAM to SAM
CRAM to BAM
SAM to BAM
|
|
gptkbp:developer
|
gptkb:Genome_Research_Limited
gptkb:Heng_Li
|
|
gptkbp:dividedInto
|
BAM files
|
|
gptkbp:firstReleased
|
2009
|
|
gptkbp:hasViewOf
|
BAM files
CRAM files
SAM files
|
|
https://www.w3.org/2000/01/rdf-schema#label
|
Samtools
|
|
gptkbp:indexedIn
|
BAM files
|
|
gptkbp:latestReleaseVersion
|
1.18
|
|
gptkbp:license
|
gptkb:MIT_License
|
|
gptkbp:officialWebsite
|
http://www.htslib.org/
|
|
gptkbp:platform
|
gptkb:Windows
gptkb:macOS
gptkb:Linux
|
|
gptkbp:relatedTo
|
gptkb:BCFtools
gptkb:HTSlib
|
|
gptkbp:supportsFormat
|
gptkb:CRAM
gptkb:SAM
BAM
|
|
gptkbp:usedFor
|
manipulating BAM files
manipulating CRAM files
manipulating SAM files
processing high-throughput sequencing data
|
|
gptkbp:writtenBy
|
C
|
|
gptkbp:bfsParent
|
gptkb:RNA-seq_data
|
|
gptkbp:bfsLayer
|
6
|