HTSlib

GPTKB entity

Statements (29)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:compressionRatio gptkb:gzip
gptkb:bzip2
xz
BGZF
gptkbp:documentation https://htslib.readthedocs.io/
gptkbp:feature indexing of sequence data
random access to compressed files
threaded I/O
API for reading and writing sequencing data formats
gptkbp:firstReleased 2014
https://www.w3.org/2000/01/rdf-schema#label HTSlib
gptkbp:license gptkb:MIT_License
gptkbp:maintainedBy Samtools team
gptkbp:operatingSystem Cross-platform
gptkbp:programmingLanguage C
gptkbp:relatedTo gptkb:BCFtools
gptkb:Samtools
gptkbp:repository https://github.com/samtools/htslib
gptkbp:supportsFormat gptkb:CRAM
gptkb:BCF
gptkb:SAM
BAM
VCF
gptkbp:usedFor processing high-throughput sequencing data
gptkbp:usedIn bioinformatics
gptkbp:website https://www.htslib.org/
gptkbp:bfsParent gptkb:Samtools
gptkbp:bfsLayer 7