SETD2

GPTKB entity

Statements (51)
Predicate Object
gptkbp:instanceOf gptkb:protein
gptkb:gene
gptkbp:alias HSPC069
HYPB
KMT3A
gptkbp:alternativeSplicing yes
gptkbp:amendedBy histone H3 lysine 36 (H3K36)
gptkbp:associatedWith gptkb:autism_spectrum_disorder
intellectual disability
clear cell renal cell carcinoma
overgrowth syndrome
Luscan-Lumish syndrome
gptkbp:biologicalProcess DNA repair
chromatin modification
transcription regulation
histone-lysine N-methyltransferase activity
gptkbp:domain gptkb:WW_domain
AWS domain
SET domain
SRI domain
Post-SET domain
gptkbp:encodes SET domain containing 2 protein
gptkbp:Entrez_Gene_ID gptkb:ENSG00000136104
29072
gptkbp:expressedIn gptkb:nucleus
gptkbp:firstDescribed 2001
gptkbp:function histone methyltransferase
gptkbp:geneType protein-coding
gptkbp:HGNC_ID HGNC:29076
https://www.w3.org/2000/01/rdf-schema#label SETD2
gptkbp:interactsWith gptkb:RNA_polymerase_II
gptkb:hnRNP_L
LEDGF/p75
gptkbp:length 2564 amino acids
gene: ~147 kb
gptkbp:locatedOnChromosome 3p21.31
gptkbp:mutationAssociatedWith loss-of-function
tumorigenesis
frequent in renal cell carcinoma
gptkbp:OMIM 612778
gptkbp:organism gptkb:Homo_sapiens
gptkbp:orthologInMouse gptkb:Setd2
gptkbp:orthologInZebrafish setd2
gptkbp:pathway chromatin organization
DNA double-strand break repair
epigenetic regulation of gene expression
gptkbp:postTranslationalModification methylation
gptkbp:subcellularLocation gptkb:nucleus
gptkbp:UniProtID Q9BYW2
gptkbp:bfsParent gptkb:chromosome_3
gptkbp:bfsLayer 6