PolyPhen

GPTKB entity

Statements (24)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:citation Adzhubei IA, et al. Nat Methods. 2010
gptkbp:developer Bork Group
Sunyaev Lab
gptkbp:firstReleased 2002
gptkbp:fullName Polymorphism Phenotyping
https://www.w3.org/2000/01/rdf-schema#label PolyPhen
gptkbp:input gptkb:protein
amino acid substitution
gptkbp:latestReleaseVersion gptkb:PolyPhen-2
gptkbp:output probability score
prediction of damaging effect
gptkbp:purpose predicts possible impact of amino acid substitutions on protein structure and function
gptkbp:relatedTo gptkb:SIFT
gptkb:MutationTaster
PROVEAN
gptkbp:supportsAlgorithm gptkb:machine_learning
sequence-based
structure-based
gptkbp:usedIn clinical genomics
genetic variant interpretation
gptkbp:website http://genetics.bwh.harvard.edu/pph2/
gptkbp:bfsParent gptkb:CADD_scores
gptkbp:bfsLayer 7