|
gptkbp:instanceOf
|
transcription factor
|
|
gptkbp:activatorProteinsInclude
|
gptkb:DctD
gptkb:NtrC
gptkb:PspF
|
|
gptkbp:alternativeName
|
gptkb:σ54
gptkb:RpoN
|
|
gptkbp:compatibleWith
|
most Gram-positive bacteria
|
|
gptkbp:doesNotRecognize
|
-35/-10 promoter elements
|
|
gptkbp:EC_number
|
2.7.7.6 (as part of RNA polymerase holoenzyme)
|
|
gptkbp:encodedBy
|
rpoN gene
|
|
gptkbp:features
|
requires ATP hydrolysis for open complex formation
|
|
gptkbp:firstDescribed
|
1980s
|
|
gptkbp:foundIn
|
gptkb:Bacteria
|
|
gptkbp:function
|
transcription initiation
regulation of nitrogen metabolism
|
|
https://www.w3.org/2000/01/rdf-schema#label
|
sigma-54
|
|
gptkbp:interactsWith
|
bacterial RNA polymerase core enzyme
|
|
gptkbp:presentIn
|
gptkb:Salmonella_enterica
gptkb:Vibrio_cholerae
gptkb:Pseudomonas_aeruginosa
gptkb:Bacteria
|
|
gptkbp:recognizedPromoterSequence
|
-24/-12 promoter elements
|
|
gptkbp:regulates
|
flagellar biosynthesis genes
genes involved in nitrogen assimilation
virulence genes in some bacteria
|
|
gptkbp:requires
|
activator proteins
|
|
gptkbp:structuralDomain
|
three conserved regions
|
|
gptkbp:bfsParent
|
gptkb:transcription_factor
|
|
gptkbp:bfsLayer
|
6
|