Statements (34)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:availableOn |
https://bioconductor.org/packages/release/bioc/html/Rsubread.html
https://subread.sourceforge.net/ |
| gptkbp:citation |
>10,000
Liao Y, Smyth GK, Shi W. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics. 2014 Apr 1;30(7):923-30. |
| gptkbp:developedBy |
gptkb:Liao,_Yang
gptkb:Shi,_Wei gptkb:Smyth,_Gordon_K. |
| gptkbp:firstPublished |
2014
|
| gptkbp:format |
gptkb:BED
gptkb:SAM BAM tab-delimited text count matrix |
| https://www.w3.org/2000/01/rdf-schema#label |
featureCounts
|
| gptkbp:license |
GPL-3.0
|
| gptkbp:operatingSystem |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:partOf |
gptkb:Subread_package
|
| gptkbp:supports |
multi-threading
exon-level counting gene-level counting paired-end reads single-end reads strand-specific counting |
| gptkbp:usedFor |
RNA-seq analysis
ChIP-seq analysis genomic feature quantification read counting |
| gptkbp:writtenBy |
C
R |
| gptkbp:bfsParent |
gptkb:RNA-seq_data
|
| gptkbp:bfsLayer |
6
|