Statements (29)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:availableOn |
gptkb:Bioconductor
|
| gptkbp:citation |
Liao Y, Smyth GK, Shi W. (2013) The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote. Nucleic Acids Res.
Liao Y, Smyth GK, Shi W. (2014) featureCounts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics. |
| gptkbp:component |
gptkb:featureCounts
Subread aligner exactSNP saf subjunc |
| gptkbp:developedBy |
gptkb:Matthew_Ritchie
Wei Shi Gordon K. Smyth Yifang Hu |
| gptkbp:firstReleased |
2013
|
| https://www.w3.org/2000/01/rdf-schema#label |
Subread package
|
| gptkbp:latestReleaseVersion |
2.0.6
|
| gptkbp:license |
gptkb:GPL-3
|
| gptkbp:operatingSystem |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:programmingLanguage |
C
R |
| gptkbp:usedFor |
read mapping
RNA-Seq data analysis gene expression quantification feature counting |
| gptkbp:website |
http://subread.sourceforge.net/
|
| gptkbp:bfsParent |
gptkb:featureCounts
|
| gptkbp:bfsLayer |
7
|