Phylogenetics

GPTKB entity

Statements (96)
Predicate Object
gptkbp:instanceOf gptkb:academic
gptkbp:appliesTo gptkb:species
populations
genes
gptkbp:fieldOfStudy biology
gptkbp:focusesOn evolutionary relationships
gptkbp:goal reconstruct evolutionary history
gptkbp:hasApplication gptkb:medicine
agriculture
ecology
epidemiology
paleontology
conservation biology
comparative genomics
https://www.w3.org/2000/01/rdf-schema#label Phylogenetics
gptkbp:notableFigure gptkb:Charles_Darwin
gptkb:Ernst_Haeckel
Willi Hennig
gptkbp:originatedIn 19th century
gptkbp:relatedTo gptkb:dictionary
systematics
cladistics
gptkbp:uses gptkb:MEGA
gptkb:UPGMA
gptkb:bridge
gptkb:species
gptkb:Clustal
gptkb:gene
gptkb:root
gptkb:mitochondrial_DNA
gptkb:BEAST
gptkb:IQ-TREE
gptkb:MAFFT
gptkb:MUSCLE
gptkb:MrBayes
gptkb:PAUP*
gptkb:RAxML
maximum likelihood
population genetics
bioinformatics
homology
Bayesian inference
statistical methods
DNA sequencing
coalescent theory
speciation
node
clade
extinction
Leaf
software tools
sequence alignment
gene tree
bootstrapping
comparative methods
morphological data
monophyly
phylogenetic trees
molecular data
phylogenetic inference
phylogenetic networks
horizontal gene transfer
autapomorphy
molecular clock
paraphyly
phylogeography
polyphyly
synapomorphy
gene duplication
genetic markers
parsimony analysis
phylogenomic analysis
distance matrix methods
evolutionary models
species tree estimation
orthology
reticulate evolution
consensus trees
tree visualization
neighbor-joining
GTR model
Jukes-Cantor model
Kimura 2-parameter model
PhyML
ancestral state reconstruction
bootstrap support
computational algorithms
divergence time estimation
outgroup selection
paralogy
species delimitation
substitution models
tree rooting
whole genome data
gptkbp:bfsParent gptkb:tree
gptkbp:bfsLayer 5