NCBI dbSNP

GPTKB entity

Statements (52)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:access public
gptkbp:citation Sherry ST, et al. Nucleic Acids Res. 2001 Jan 1;29(1):308-11.
gptkbp:contains functional annotation
allele frequency data
genomic context
population-specific data
reference SNP cluster IDs (rsIDs)
gptkbp:dataDownload gptkb:FTP
gptkb:REST_API
gptkb:mobile_application
gptkbp:dataSubmission open to public
gptkbp:focus single nucleotide polymorphisms
small-scale genetic variation
microsatellite markers
non-polymorphic variants
short deletion and insertion polymorphisms
gptkbp:format gptkb:JSON
XML
VCF
flat file
https://www.w3.org/2000/01/rdf-schema#label NCBI dbSNP
gptkbp:integratesWith gptkb:NCBI_Gene
gptkb:Ensembl
gptkb:UCSC_Genome_Browser
NCBI ClinVar
NCBI Genome
gptkbp:launched 1998
gptkbp:license public domain
gptkbp:maintainedBy gptkb:National_Center_for_Biotechnology_Information
gptkbp:partOf gptkb:NCBI_Entrez_system
gptkbp:recognizedBy ss
rs
gptkbp:relatedTo gptkb:dbGaP
gptkb:dbVar
gptkb:1000_Genomes_Project
gptkbp:species gptkb:Mus_musculus
gptkb:Homo_sapiens
other model organisms
gptkbp:supports population genetics
clinical variant interpretation
evolutionary studies
genome-wide association studies
personal genomics
gptkbp:type genetic variation
gptkbp:updated regularly
gptkbp:usedBy medical researchers
geneticists
bioinformaticians
gptkbp:website https://www.ncbi.nlm.nih.gov/snp/
gptkbp:bfsParent gptkb:NCBI_Gene
gptkbp:bfsLayer 6