Minimap2

GPTKB entity

Statements (34)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:application genome assembly
sequence alignment
long-read mapping
short-read mapping
gptkbp:citation Li H. Minimap2: pairwise alignment for nucleotide sequences. Bioinformatics. 2018.
gptkbp:developer gptkb:Heng_Li
gptkbp:feature high performance
low memory usage
chimeric alignment detection
splice-aware alignment
split-read alignment
gptkbp:format gptkb:FASTQ
gptkb:PAF
gptkb:FASTA
gptkb:SAM
https://www.w3.org/2000/01/rdf-schema#label Minimap2
gptkbp:license gptkb:MIT_License
gptkbp:operatingSystem gptkb:Windows
gptkb:macOS
gptkb:Linux
gptkbp:programmingLanguage C
gptkbp:relatedTo gptkb:BLAST
BWA
GraphMap
NGMLR
gptkbp:releaseYear 2018
gptkbp:repository https://github.com/lh3/minimap2
gptkbp:usedFor Illumina reads
Oxford Nanopore reads
PacBio reads
gptkbp:website https://github.com/lh3/minimap2
gptkbp:bfsParent gptkb:Heng_Li
gptkbp:bfsLayer 7