Gene Expression Omnibus (GEO)

GPTKB entity

Predicate	Object
gptkbp:instanceOf	gptkb:database
gptkbp:abbreviation	gptkb:GEO
gptkbp:access	open access
gptkbp:category	gptkb:database bioinformatics resource
gptkbp:citation	Edgar R, Domrachev M, Lash A. Nucleic Acids Res. 2002 Jan 1;30(1):207-10.
gptkbp:country	gptkb:United_States
gptkbp:dataReuse	permitted
gptkbp:dataSource	gptkb:FTP gptkb:REST_API gptkb:mobile_application gptkb:Entrez gptkb:GEOquery_(R_package) researchers worldwide
gptkbp:focus	gene expression data functional genomics data
gptkbp:format	gptkb:TXT gptkb:MINiML gptkb:SOFT XML CSV
gptkbp:fundedBy	gptkb:U.S._government
gptkbp:hostedBy	gptkb:NCBI
https://www.w3.org/2000/01/rdf-schema#label	Gene Expression Omnibus (GEO)
gptkbp:language	English
gptkbp:launched	2000
gptkbp:license	public domain
gptkbp:maintainedBy	gptkb:National_Center_for_Biotechnology_Information
gptkbp:numberOfVolumes	millions of samples
gptkbp:recognizedBy	gptkb:GSM gptkb:GPL gptkb:GSE
gptkbp:relatedTo	gptkb:ArrayExpress gptkb:NCBI
gptkbp:subjectArea	epigenomics genomics systems biology transcriptomics
gptkbp:type	gptkb:ChIP-Seq next-generation sequencing DNA methylation microarray RNA-Seq
gptkbp:usedFor	meta-analysis data mining bioinformatics research
gptkbp:website	https://www.ncbi.nlm.nih.gov/geo/
gptkbp:YouTubeChannel	private public
gptkbp:bfsParent	gptkb:LINCS_L1000_dataset
gptkbp:bfsLayer	6