GEO (Gene Expression Omnibus)

URI: https://gptkb.org/entity/GEO_(Gene_Expression_Omnibus)
GPTKB entity
Statements (55)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:abbreviation gptkb:GEO
gptkbp:access open access
gptkbp:accessionNumber gptkb:GDS
gptkb:GSM
gptkb:GPL
gptkb:GSE
gptkbp:citation Edgar R, Domrachev M, Lash AE. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res. 2002 Jan 1;30(1):207-10.
gptkbp:country gptkb:United_States
gptkbp:dataCuration curated by NCBI staff
gptkbp:dataReuse permitted
encouraged
gptkbp:dataSource downloadable
searchable
browsable
gptkbp:dataSubmission user-submitted
gptkbp:focus gene expression
functional genomics
gptkbp:format gptkb:TXT
gptkb:MINiML
gptkb:SOFT
XML
CSV
gptkbp:fullName gptkb:Gene_Expression_Omnibus
https://www.w3.org/2000/01/rdf-schema#label GEO (Gene Expression Omnibus)
gptkbp:language English
gptkbp:launched 2000
gptkbp:maintainedBy gptkb:National_Center_for_Biotechnology_Information
gptkbp:numberOfVolumes millions of samples
hundreds of thousands of studies
gptkbp:recognizedBy gptkb:GSM
gptkb:GPL
gptkb:GSE
gptkbp:relatedTo gptkb:ArrayExpress
gptkb:NCBI
gptkbp:repository public repository
gptkbp:subjectArea genomics
molecular biology
bioinformatics
systems biology
gptkbp:type ChIP-Seq data
RNA-Seq data
microarray data
proteomics data
epigenomics data
high-throughput sequencing data
single-cell RNA-Seq data
gptkbp:usedBy biomedical researchers
gptkbp:website https://www.ncbi.nlm.nih.gov/geo/
gptkbp:YouTubeChannel gptkb:book_series
gptkb:software
gptkb:dataset
sample
gptkbp:bfsParent gptkb:DNA_microarrays
gptkbp:bfsLayer 6