Statements (28)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
sequencing technique
|
| gptkbp:alternativeTo |
gptkb:RNA-seq
gptkb:SAGE_sequencing |
| gptkbp:analyzes |
5' end of mRNA
|
| gptkbp:developedBy |
gptkb:Riken_Institute
|
| gptkbp:enables |
analysis of alternative promoter usage
discovery of novel promoters identification of promoters quantification of transcript abundance |
| gptkbp:firstDescribed |
2003
|
| gptkbp:fullName |
gptkb:Cap_Analysis_of_Gene_Expression_sequencing
|
| https://www.w3.org/2000/01/rdf-schema#label |
CAGE sequencing
|
| gptkbp:output |
gptkb:CAGE_tags
TSS maps expression levels |
| gptkbp:relatedTo |
gptkb:TSS-seq
RNA sequencing |
| gptkbp:requires |
RNA with intact 5' cap
|
| gptkbp:supportsProtocol |
reverse transcription
high-throughput sequencing cap-trapping |
| gptkbp:type |
short sequence tags
|
| gptkbp:usedFor |
gene expression profiling
transcription start site mapping |
| gptkbp:usedIn |
gptkb:FANTOM_projects
gptkb:ENCODE_project |
| gptkbp:bfsParent |
gptkb:CAGE_data
|
| gptkbp:bfsLayer |
6
|