BLAST algorithm

URI: https://gptkb.org/entity/BLAST_algorithm
GPTKB entity
Statements (36)
Predicate Object
gptkbp:instanceOf gptkb:bioinformatics_algorithm
gptkbp:citation over 100,000
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990 Oct 5;215(3):403-10.
gptkbp:commonIn evolutionary biology
genomics
molecular biology
metagenomics
gptkbp:developedBy gptkb:Eugene_Myers
gptkb:Stephen_Altschul
gptkb:Warren_Gish
gptkb:Webb_Miller
gptkb:David_Lipman
gptkbp:fullName gptkb:Basic_Local_Alignment_Search_Tool
gptkbp:hasVariant gptkb:BLASTN
gptkb:BLASTP
gptkb:BLASTX
gptkb:TBLASTN
gptkb:TBLASTX
gptkbp:implementedIn gptkb:NCBI_BLAST
gptkbp:input gptkb:protein
nucleotide sequence
gptkbp:output gptkb:alignment
E-value
similarity score
gptkbp:publicationYear 1990
gptkbp:publishedIn gptkb:Journal_of_Molecular_Biology
gptkbp:significanceMetric E-value
bit score
gptkbp:supportsAlgorithm gptkb:heuristic
gptkbp:usedFor sequence alignment
database searching
homology detection
gptkbp:website https://blast.ncbi.nlm.nih.gov/Blast.cgi
gptkbp:bfsParent gptkb:David_Lipman
gptkbp:bfsLayer 6
https://www.w3.org/2000/01/rdf-schema#label BLAST algorithm