Basic Local Alignment Search Tool

URI: https://gptkb.org/entity/Basic_Local_Alignment_Search_Tool

GPTKB entity

Statements (51)

Predicate	Object
gptkbp:instanceOf	gptkb:software
gptkbp:abbreviation	gptkb:BLAST
gptkbp:application	genomics molecular biology bioinformatics
gptkbp:citation	over 100,000 Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990 Oct 5;215(3):403-10.
gptkbp:database	gptkb:PDB gptkb:RefSeq gptkb:GenBank gptkb:Swiss-Prot
gptkbp:developer	gptkb:Eugene_Myers gptkb:Stephen_Altschul gptkb:Warren_Gish gptkb:Webb_Miller gptkb:David_Lipman gptkb:National_Center_for_Biotechnology_Information
gptkbp:firstReleased	1990
gptkbp:hasFeature	database search local alignment statistical significance estimation multiple sequence alignment (via related tools)
gptkbp:hasVersion	gptkb:BLASTN gptkb:BLASTP gptkb:BLASTX gptkb:TBLASTN gptkb:TBLASTX
https://www.w3.org/2000/01/rdf-schema#label	Basic Local Alignment Search Tool
gptkbp:input	nucleotide sequences protein sequences
gptkbp:license	public domain
gptkbp:mainFunction	sequence alignment sequence similarity search
gptkbp:managementInterface	gptkb:NCBI_BLAST_web_server
gptkbp:output	sequence alignments E-value alignment score
gptkbp:platform	cross-platform
gptkbp:programmingLanguage	C
gptkbp:relatedTo	gptkb:Smith-Waterman_algorithm gptkb:FASTA sequence alignment algorithms
gptkbp:repository	https://blast.ncbi.nlm.nih.gov/Blast.cgi
gptkbp:supportsAlgorithm	gptkb:algorithm
gptkbp:usedBy	researchers worldwide
gptkbp:usedFor	comparative genomics gene annotation phylogenetic analysis identifying homologous sequences
gptkbp:bfsParent	gptkb:BLAST
gptkbp:bfsLayer	5