ArchR

GPTKB entity

Statements (22)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:citation Granja JM et al., Nature Genetics 2021
gptkbp:developer Greenleaf Lab
gptkbp:documentation https://www.archrproject.com/bookdown/
gptkbp:firstReleased 2020
https://www.w3.org/2000/01/rdf-schema#label ArchR
gptkbp:license GPL-3.0
gptkbp:openSource true
gptkbp:platform R/Bioconductor
gptkbp:programmingLanguage R
gptkbp:repository https://github.com/GreenleafLab/ArchR
gptkbp:supports gptkb:scATAC-seq
gptkb:data_visualization
peak calling
trajectory analysis
cell clustering
gene score calculation
multi-omic data integration
gptkbp:usedFor single-cell ATAC-seq analysis
gptkbp:website https://www.archrproject.com/
gptkbp:bfsParent gptkb:ATAC-seq
gptkbp:bfsLayer 7