Statements (50)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:gene
RNA molecule |
| gptkbp:component |
30S small ribosomal subunit
|
| gptkbp:conservedIn |
highly conserved
|
| gptkbp:database |
gptkb:NCBI
gptkb:RDP Greengenes SILVA |
| gptkbp:discoveredBy |
gptkb:Carl_Woese
|
| gptkbp:encodedBy |
gptkb:16S_rRNA_gene
|
| gptkbp:foundIn |
prokaryotes
|
| gptkbp:function |
ribosome assembly
mRNA binding decoding genetic information |
| gptkbp:gene |
gptkb:16S_rRNA
|
| https://www.w3.org/2000/01/rdf-schema#label |
16S ribosomal RNA
|
| gptkbp:interactsWith |
gptkb:gene
tRNA ribosomal proteins |
| gptkbp:length |
~1500 nucleotides
|
| gptkbp:orthologIn |
18S ribosomal RNA (eukaryotes)
|
| gptkbp:structure |
secondary structure with stem-loops
|
| gptkbp:usedFor |
environmental monitoring
food safety testing environmental microbiology biotechnology research disease outbreak investigation metagenomics clinical diagnostics microbiome analysis antibiotic resistance studies water quality testing bacterial classification bacterial taxonomy bacterial phylogeny archaeal phylogeny bacterial community profiling bacterial systematics identifying unculturable bacteria microbial taxonomy studying microbial diversity |
| gptkbp:usedIn |
gptkb:Sanger_sequencing
next-generation sequencing bacterial identification phylogenetic studies PCR amplification amplicon sequencing |
| gptkbp:variableRegions |
V1-V9
|
| gptkbp:bfsParent |
gptkb:16S_rRNA_gene
|
| gptkbp:bfsLayer |
7
|