TFASTX program

GPTKB entity

Statements (21)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:aligns translated nucleotide sequences to protein query
gptkbp:availableOn gptkb:Windows
gptkb:UNIX
gptkb:Linux
gptkbp:developedBy gptkb:William_R._Pearson
gptkbp:firstReleased 1990s
https://www.w3.org/2000/01/rdf-schema#label TFASTX program
gptkbp:input gptkb:protein
nucleotide sequence database
gptkbp:license open source
gptkbp:output sequence alignments
gptkbp:partOf gptkb:FASTA_suite
gptkbp:relatedTo gptkb:FASTA_program
BLASTX program
gptkbp:supportsAlgorithm sequence alignment
gptkbp:translatedInto nucleotide sequences in all six frames
gptkbp:usedFor protein sequence similarity searching
gptkbp:website https://fasta.bioch.virginia.edu/fasta_www2/fasta_list2.shtml
gptkbp:bfsParent gptkb:FASTA_suite
gptkbp:bfsLayer 6