Statements (21)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:citation |
Pertea M, Pertea GM, Antonescu CM, Chang TC, Mendell JT, Salzberg SL. StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat Biotechnol. 2015.
|
| gptkbp:developedBy |
gptkb:Cole_Trapnell
gptkb:Lior_Pachter |
| gptkbp:firstReleased |
2015
|
| gptkbp:format |
gptkb:FASTA
BAM GTF |
| https://www.w3.org/2000/01/rdf-schema#label |
StringTie
|
| gptkbp:latestReleaseVersion |
2.2.1
|
| gptkbp:license |
gptkb:MIT_License
|
| gptkbp:operatingSystem |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:programmingLanguage |
gptkb:C++
|
| gptkbp:repository |
https://github.com/gpertea/stringtie
|
| gptkbp:usedFor |
transcriptome assembly
RNA-Seq data analysis |
| gptkbp:website |
https://ccb.jhu.edu/software/stringtie/
|
| gptkbp:bfsParent |
gptkb:RNA-seq_data
|
| gptkbp:bfsLayer |
6
|