Statements (29)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:algorithm
|
| gptkbp:application |
DNA sequence alignment
RNA sequence alignment protein sequence alignment |
| gptkbp:complexity |
O(mn)
|
| gptkbp:developedBy |
gptkb:Michael_S._Waterman
gptkb:Temple_F._Smith |
| gptkbp:feature |
scoring matrix
gap penalties traceback |
| gptkbp:field |
computational biology
bioinformatics |
| https://www.w3.org/2000/01/rdf-schema#label |
Smith-Waterman algorithm
|
| gptkbp:influenced |
gptkb:BLAST_algorithm
gptkb:FASTA_algorithm |
| gptkbp:input |
two sequences
|
| gptkbp:introducedIn |
1981
|
| gptkbp:optimizedFor |
parallel computing
GPU acceleration SIMD instructions |
| gptkbp:output |
optimal local alignment
|
| gptkbp:publishedIn |
gptkb:Journal_of_Molecular_Biology
|
| gptkbp:purpose |
local sequence alignment
|
| gptkbp:relatedTo |
gptkb:Needleman-Wunsch_algorithm
|
| gptkbp:uses |
dynamic programming
|
| gptkbp:bfsParent |
gptkb:Michael_Waterman
gptkb:Basic_Local_Alignment_Search_Tool gptkb:Temple_F._Smith |
| gptkbp:bfsLayer |
6
|