SMC++

GPTKB entity

Statements (26)
Predicate Object
gptkbp:instanceOf gptkb:software
population genetics tool
gptkbp:author J. A. Kamm
J. Terhorst
Y. S. Song
gptkbp:availableOn gptkb:GitHub
gptkbp:canInfer effective population size changes
population split times
gptkbp:category gptkb:software
genomics
gptkbp:citation Terhorst, Kamm, Song (2017), Nature Genetics
gptkbp:firstPublished 2017
gptkbp:format VCF
genotype data
https://www.w3.org/2000/01/rdf-schema#label SMC++
gptkbp:implementedIn sequentially Markovian coalescent model
gptkbp:license gptkb:MIT_License
gptkbp:supports multiple genomes
unphased data
gptkbp:usedFor demographic inference
inferring population size history
gptkbp:website https://github.com/popgenmethods/smcpp
gptkbp:writtenBy gptkb:Python
gptkb:C++
gptkbp:bfsParent gptkb:PSMC
gptkbp:bfsLayer 7