SAMtools

GPTKB entity

Statements (28)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:category gptkb:software
genomics
bioinformatics
gptkbp:citation Li H, Handsaker B, Wysoker A, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009.
gptkbp:commandLineTool true
gptkbp:developer gptkb:Heng_Li
gptkbp:firstReleased 2009
https://www.w3.org/2000/01/rdf-schema#label SAMtools
gptkbp:latestReleaseVersion 2023-10-10
1.18
gptkbp:license gptkb:MIT_License
gptkbp:operatingSystem Cross-platform
gptkbp:partOf gptkb:HTSlib_project
gptkbp:programmingLanguage C
gptkbp:repository https://github.com/samtools/samtools
gptkbp:supportsFormat gptkb:CRAM
gptkb:SAM
BAM
gptkbp:usedFor variant calling
file format conversion
indexing alignments
sequence alignment processing
sorting alignments
viewing alignments
gptkbp:website http://www.htslib.org/
gptkbp:bfsParent gptkb:Bioinformatics
gptkbp:bfsLayer 5