Regulatory Sequence Analysis Tools

GPTKB entity

Statements (33)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:abbreviation gptkb:RSAT
gptkbp:availableOn gptkb:server
standalone package
gptkbp:category computational biology
genomics
bioinformatics
gptkbp:citation Medina-Rivera A, et al. (2015) Nucleic Acids Res. 43:W50-6.
Thomas-Chollier M, et al. (2011) Nucleic Acids Res. 39:W86-91.
gptkbp:developedBy Denis Thieffry
Jacques van Helden
gptkbp:firstReleased 1998
https://www.w3.org/2000/01/rdf-schema#label Regulatory Sequence Analysis Tools
gptkbp:license free for academic use
gptkbp:organism gptkb:Bacteria
animals
fungi
plants
gptkbp:programmingLanguage gptkb:Perl
gptkb:Python
R
gptkbp:purpose regulatory genomics
motif discovery
analysis of regulatory sequences
gptkbp:usedFor pattern matching
sequence retrieval
transcription factor binding site prediction
regulatory network analysis
motif scanning
motif comparison
gptkbp:website http://rsat.eu/
gptkbp:bfsParent gptkb:RSAT
gptkbp:bfsLayer 7