RAST (Rapid Annotation using Subsystem Technology)
GPTKB entity
Statements (41)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
web-based service |
| gptkbp:citation |
gptkb:Overbeek_R,_et_al._(2005)_Nucleic_Acids_Research_33:5691-5702.
Aziz RK, et al. (2008) BMC Genomics 9:75. |
| gptkbp:developedBy |
gptkb:Argonne_National_Laboratory
gptkb:Fellowship_for_Interpretation_of_Genomes_(FIG) |
| gptkbp:feature |
comparative genomics
protein function prediction user account system manual curation job tracking automatic annotation downloadable results export of annotated genomes gene calling integration with SEED Viewer metabolic pathway reconstruction subsystem-based approach support for metagenomes (via MG-RAST) |
| gptkbp:freeFrom |
academic use
|
| https://www.w3.org/2000/01/rdf-schema#label |
RAST (Rapid Annotation using Subsystem Technology)
|
| gptkbp:input |
genome sequence
|
| gptkbp:interface |
gptkb:REST_API
gptkb:mobile_application |
| gptkbp:language |
English
|
| gptkbp:license |
free for academic use
|
| gptkbp:output |
annotated genome
|
| gptkbp:provides |
functional role assignments
metabolic reconstruction subsystem-based annotation |
| gptkbp:relatedTo |
gptkb:MG-RAST
gptkb:SEED_database gptkb:PATRIC |
| gptkbp:releaseYear |
2008
|
| gptkbp:supports |
archaeal genomes
bacterial genomes |
| gptkbp:usedFor |
genome annotation
functional annotation of microbial genomes |
| gptkbp:website |
https://rast.nmpdr.org/
|
| gptkbp:bfsParent |
gptkb:Ross_Overbeek
|
| gptkbp:bfsLayer |
7
|