PRIDE database

GPTKB entity

Statements (51)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:abbreviation gptkb:PRIDE
gptkbp:access open access
gptkbp:citation Vizcaíno JA, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D447-56.
Vizcaíno JA, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D442-D450.
gptkbp:country gptkb:United_Kingdom
gptkbp:dataReuse meta-analysis
method development
biological discovery
gptkbp:dataSubmission researchers worldwide
gptkbp:focus mass spectrometry
proteomics data
protein identification
protein quantification
gptkbp:format gptkb:PRIDE_XML
gptkb:mzIdentML
gptkb:mzML
gptkb:mzTab
gptkbp:frequency regularly updated
gptkbp:fullName gptkb:PRoteomics_IDEntifications_database
gptkbp:hostedBy gptkb:EMBL-EBI
https://www.w3.org/2000/01/rdf-schema#label PRIDE database
gptkbp:license CC0
gptkbp:maintainedBy gptkb:European_Bioinformatics_Institute
gptkbp:numberOfVolumes tens of thousands of datasets
gptkbp:partOf gptkb:ProteomeXchange_Consortium
gptkbp:recognizedBy gptkb:PXD
gptkbp:relatedTo gptkb:PeptideAtlas
gptkb:MassIVE
gptkb:ProteomeXchange
gptkb:iProX
gptkb:jPOST
gptkbp:releaseYear 2005
gptkbp:subjectArea life sciences
proteomics
bioinformatics
gptkbp:type protein-protein interactions
protein expression
post-translational modifications
quantitative proteomics
peptide identification
processed proteomics results
proteomics experiments
public proteomics data
raw mass spectrometry data
gptkbp:url https://www.ebi.ac.uk/pride/
gptkbp:usedFor meta-analysis
data sharing
data re-use
gptkbp:bfsParent gptkb:European_Bioinformatics_Institute_(EMBL-EBI)
gptkbp:bfsLayer 5