Statements (53)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:database
|
| gptkbp:abbreviation |
gptkb:PHI-base
|
| gptkbp:application |
comparative genomics
functional genomics crop improvement bioinformatics research disease management |
| gptkbp:citation |
Urban M, et al. (2022) PHI-base: the pathogen–host interactions database. Nucleic Acids Research.
|
| gptkbp:curationMethod |
literature mining
manual curation |
| gptkbp:firstReleased |
2005
|
| gptkbp:focus |
disease resistance
pathogenicity virulence pathogen-host interactions effector genes |
| gptkbp:format |
gptkb:REST_API
gptkb:mobile_application downloadable flat files |
| gptkbp:frequency |
regularly updated
|
| gptkbp:fullName |
Pathogen-Host Interactions database
|
| gptkbp:fundedBy |
Biotechnology and Biological Sciences Research Council (BBSRC)
|
| https://www.w3.org/2000/01/rdf-schema#label |
PHI-base
|
| gptkbp:language |
English
|
| gptkbp:license |
open access
|
| gptkbp:location |
Harpenden, United Kingdom
|
| gptkbp:maintainedBy |
gptkb:Rothamsted_Research
|
| gptkbp:numberOfGenes |
over 8000 gene entries (as of 2022)
|
| gptkbp:numberOfHostSpecies |
over 200 host species
|
| gptkbp:numberOfPathogenSpecies |
over 280 pathogen species
|
| gptkbp:organismTypes |
gptkb:protists
gptkb:Bacteria fungi nematodes viruses oomycetes hosts (plants, animals, humans) |
| gptkbp:relatedTo |
gptkb:Gene_Ontology
gptkb:UniProt gptkb:Ensembl_Fungi gptkb:FungiDB |
| gptkbp:targetAudience |
gptkb:researchers
bioinformaticians plant pathologists molecular biologists |
| gptkbp:type |
gene function
host range mutant phenotypes disease outcome experimentally verified pathogenicity genes |
| gptkbp:url |
https://www.phi-base.org/
|
| gptkbp:bfsParent |
gptkb:Gene_Ontology_Consortium
|
| gptkbp:bfsLayer |
7
|