NCBI GEO

GPTKB entity

Statements (55)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:abbreviation gptkb:GEO
gptkbp:access open access
gptkbp:citation Edgar R, Domrachev M, Lash AE. Nucleic Acids Res. 2002 Jan 1;30(1):207-10.
gptkbp:country gptkb:United_States
gptkbp:dataSubmission public
private (embargoed)
gptkbp:format gptkb:GEO_DataSet
gptkb:GEO_Sample
gptkb:GEO_Series_Matrix
gptkb:TXT
gptkb:MINiML
gptkb:SOFT
XML
CSV
gptkbp:fullName gptkb:National_Center_for_Biotechnology_Information_Gene_Expression_Omnibus
gptkbp:hasAccessionTypes gptkb:GDS
gptkb:GSM
gptkb:GPL
gptkb:GSE
gptkbp:hasBrowserInterface yes
gptkbp:hasCuration yes
gptkbp:hasDataVisualization yes
gptkbp:hasDownloadFunction yes
gptkbp:hasFTP yes
gptkbp:hasUserSubmission yes
https://www.w3.org/2000/01/rdf-schema#label NCBI GEO
gptkbp:language English
gptkbp:launched 2000
gptkbp:license public domain
gptkbp:maintainedBy gptkb:National_Institutes_of_Health
gptkb:National_Center_for_Biotechnology_Information
gptkbp:numberOfVolumes millions of samples
gptkbp:recognizedBy GEO accession number
gptkbp:relatedTo gptkb:SRA
gptkb:ArrayExpress
gptkb:NCBI
gptkbp:searchableBy yes
gptkbp:subjectArea gene expression
functional genomics
gptkbp:supportedBy yes
gptkbp:type gptkb:ChIP-Seq
next-generation sequencing
DNA methylation
microarray
RNA-Seq
gptkbp:usedFor data mining
data sharing
storing high-throughput gene expression data
gptkbp:website https://www.ncbi.nlm.nih.gov/geo/
gptkbp:bfsParent gptkb:NCBI_Gene
gptkb:ENCODE
gptkb:Roadmap_Epigenomics_Project
gptkb:modENCODE
gptkbp:bfsLayer 6