Multiple Sequence Comparison by Log-Expectation

GPTKB entity

Predicate	Object
gptkbp:instanceOf	gptkb:software
gptkbp:abbreviation	gptkb:MUSCLE
gptkbp:alternativeTo	gptkb:MAFFT gptkb:ClustalW gptkb:T-Coffee
gptkbp:category	gptkb:sequence_alignment_software
gptkbp:citation	over 20,000 (as of 2024) Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792-1797.
gptkbp:developer	gptkb:Robert_C._Edgar
gptkbp:feature	high accuracy high throughput iterative refinement progressive alignment log-expectation score
gptkbp:field	bioinformatics
gptkbp:firstReleased	2004
gptkbp:format	gptkb:HTML gptkb:NEXUS gptkb:MSF gptkb:Clustal gptkb:FASTA gptkb:Phylip
gptkbp:latestReleaseVersion	MUSCLE v5 (as of 2024)
gptkbp:license	open source
gptkbp:operatingSystem	cross-platform
gptkbp:platform	gptkb:server command-line
gptkbp:programmingLanguage	gptkb:C++
gptkbp:purpose	gptkb:multiple_sequence_alignment
gptkbp:repository	https://github.com/rcedgar/muscle
gptkbp:usedFor	DNA sequence alignment RNA sequence alignment protein sequence alignment
gptkbp:website	https://www.drive5.com/muscle/
gptkbp:bfsParent	gptkb:MUSCLE
gptkbp:bfsLayer	7
https://www.w3.org/2000/01/rdf-schema#label	Multiple Sequence Comparison by Log-Expectation