Multiple Sequence Comparison by Log-Expectation
GPTKB entity
Statements (37)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:abbreviation |
gptkb:MUSCLE
|
| gptkbp:alternativeTo |
gptkb:MAFFT
gptkb:ClustalW gptkb:T-Coffee |
| gptkbp:category |
sequence alignment software
|
| gptkbp:citation |
over 20,000 (as of 2024)
Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792-1797. |
| gptkbp:developer |
gptkb:Robert_C._Edgar
|
| gptkbp:feature |
high accuracy
high throughput iterative refinement progressive alignment log-expectation score |
| gptkbp:field |
bioinformatics
|
| gptkbp:firstReleased |
2004
|
| gptkbp:format |
gptkb:HTML
gptkb:NEXUS gptkb:MSF gptkb:Clustal gptkb:FASTA gptkb:Phylip |
| https://www.w3.org/2000/01/rdf-schema#label |
Multiple Sequence Comparison by Log-Expectation
|
| gptkbp:latestReleaseVersion |
MUSCLE v5 (as of 2024)
|
| gptkbp:license |
open source
|
| gptkbp:operatingSystem |
cross-platform
|
| gptkbp:platform |
gptkb:server
command-line |
| gptkbp:programmingLanguage |
gptkb:C++
|
| gptkbp:purpose |
multiple sequence alignment
|
| gptkbp:repository |
https://github.com/rcedgar/muscle
|
| gptkbp:usedFor |
DNA sequence alignment
RNA sequence alignment protein sequence alignment |
| gptkbp:website |
https://www.drive5.com/muscle/
|
| gptkbp:bfsParent |
gptkb:MUSCLE
|
| gptkbp:bfsLayer |
7
|