T-Coffee

GPTKB entity

Statements (32)
Predicate Object
gptkbp:instanceOf multiple sequence alignment software
gptkbp:application bioinformatics
sequence alignment
gptkbp:canAlign DNA sequences
RNA sequences
protein sequences
gptkbp:citation Notredame, C., Higgins, D. G., & Heringa, J. (2000). T-Coffee: A novel method for fast and accurate multiple sequence alignment. Journal of Molecular Biology, 302(1), 205-217.
gptkbp:developer Cedric Notredame
gptkbp:feature command-line interface available
combines results from several alignment methods
generates consensus alignments
graphical user interface available
supports profile alignments
supports structural alignments
web server available
gptkbp:firstReleased 2000
gptkbp:format gptkb:HTML
gptkb:MSF
gptkb:Clustal
gptkb:FASTA
gptkb:Phylip
https://www.w3.org/2000/01/rdf-schema#label T-Coffee
gptkbp:license gptkb:GPL
gptkbp:operatingSystem Cross-platform
gptkbp:programmingLanguage C
gptkbp:software gptkb:MAFFT
gptkb:MUSCLE
gptkb:ClustalW
gptkbp:website http://www.tcoffee.org/
gptkbp:bfsParent gptkb:MAFFT
gptkb:MUSCLE
gptkbp:bfsLayer 7