Statements (23)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:application |
RNA-Seq quantification
|
| gptkbp:citation |
gptkb:Bray,_N.L.,_Pimentel,_H.,_Melsted,_P.,_&_Pachter,_L._(2016)._Near-optimal_probabilistic_RNA-seq_quantification._Nature_Biotechnology,_34(5),_525–527.
|
| gptkbp:developer |
gptkb:Lior_Pachter
gptkb:Páll_Melsted |
| gptkbp:feature |
pseudoalignment
transcript abundance estimation |
| gptkbp:firstReleased |
2015
|
| gptkbp:format |
gptkb:FASTQ
TSV |
| https://www.w3.org/2000/01/rdf-schema#label |
Kallisto software
|
| gptkbp:license |
gptkb:BSD_license
|
| gptkbp:operatingSystem |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:programmingLanguage |
gptkb:Python
gptkb:C++ |
| gptkbp:repository |
https://github.com/pachterlab/kallisto
|
| gptkbp:usedIn |
transcriptomics
single-cell RNA-Seq analysis |
| gptkbp:website |
https://pachterlab.github.io/kallisto/
|
| gptkbp:bfsParent |
gptkb:Lior_Pachter
|
| gptkbp:bfsLayer |
6
|