Ion Torrent sequencing platform

URI: https://gptkb.org/entity/Ion_Torrent_sequencing_platform

GPTKB entity

Statements (57)

Predicate	Object
gptkbp:instanceOf	DNA sequencer
gptkbp:acquiredBy	gptkb:Thermo_Fisher_Scientific gptkb:Life_Technologies
gptkbp:application	cancer genomics forensic analysis clinical diagnostics agricultural genomics microbial genomics
gptkbp:automated	gptkb:Ion_Chef_System
gptkbp:compatibleWith	optical detection
gptkbp:competitor	gptkb:Pacific_Biosciences gptkb:Oxford_Nanopore Illumina sequencing
gptkbp:dataAnalysisSoftware	gptkb:Ion_Reporter gptkb:Torrent_Suite
gptkbp:detectionPrinciple	pH change
gptkbp:detects	hydrogen ions
gptkbp:developedBy	gptkb:Ion_Torrent_Systems,_Inc.
gptkbp:errorDetection	homopolymer errors
gptkbp:founder	gptkb:Jonathan_M._Rothberg
gptkbp:headquarters	gptkb:Guilford,_Connecticut,_USA
https://www.w3.org/2000/01/rdf-schema#label	Ion Torrent sequencing platform
gptkbp:introducedIn	2010
gptkbp:libraryPreparation	gptkb:emulsion_PCR
gptkbp:marketedAs	gptkb:Thermo_Fisher_Scientific
gptkbp:notablePublication	gptkb:Rothberg_et_al.,_Nature,_2011
gptkbp:platforms	gptkb:Ion_PGM gptkb:Ion_Proton gptkb:Ion_S5 gptkb:Ion_S5_XL
gptkbp:readLength	up to 400 bp
gptkbp:sequencingChemistry	sequencing by synthesis
gptkbp:sequencingChip	semiconductor chip
gptkbp:sequencingChipTypes	gptkb:314_chip gptkb:316_chip gptkb:318_chip gptkb:Ion_520_chip gptkb:Ion_530_chip gptkb:Ion_540_chip
gptkbp:sequencingMethod	semiconductor sequencing
gptkbp:sequencingOutput	up to several gigabases per run
gptkbp:sequencingSpeed	gptkb:fire
gptkbp:type	gptkb:gene blood FFPE tissue microbial samples
gptkbp:usedFor	DNA sequencing exome sequencing whole genome sequencing RNA sequencing amplicon sequencing targeted sequencing
gptkbp:website	https://www.thermofisher.com/us/en/home/life-science/sequencing/next-generation-sequencing/ion-torrent-next-generation-sequencing-workflow.html
gptkbp:workflow	library preparation, template preparation, sequencing, data analysis
gptkbp:bfsParent	gptkb:Ion_Torrent gptkb:Life_Technologies
gptkbp:bfsLayer	7