InParanoid

GPTKB entity

Statements (23)
Predicate Object
gptkbp:instanceOf bioinformatics database
gptkbp:citation Ostlund G, Schmitt T, Forslund K, Köstler T, Messina DN, Roopra S, Frings O, Sonnhammer EL. InParanoid 7: new algorithms and tools for eukaryotic orthology analysis. Nucleic Acids Res. 2010 Jan;38(Database issue):D196-203.
gptkbp:developedBy Björn Ostlund
Erik L.L. Sonnhammer
gptkbp:firstReleased 2001
gptkbp:focusesOn ortholog identification
gptkbp:hasSpecies eukaryotes
https://www.w3.org/2000/01/rdf-schema#label InParanoid
gptkbp:input protein sequences
gptkbp:latestReleaseVersion 2015
8.0
gptkbp:license free for academic use
gptkbp:output ortholog clusters
gptkbp:relatedTo gptkb:eggNOG
gptkb:OMA
gptkb:OrthoMCL
gptkbp:supportsAlgorithm pairwise sequence similarity
reciprocal best hits
gptkbp:type protein orthologs
gptkbp:usedFor comparative genomics
gptkbp:website http://inparanoid.sbc.su.se/
gptkbp:bfsParent gptkb:Gene_database
gptkbp:bfsLayer 7