Harmonizome

GPTKB entity

Statements (63)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:citation Rouillard AD, Gundersen GW, Fernandez NF, et al. The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins. Database (Oxford). 2016;2016:baw100.
gptkbp:developedBy Ma'ayan Laboratory
gptkbp:focusesOn gene and protein information
gptkbp:hostedBy gptkb:Icahn_School_of_Medicine_at_Mount_Sinai
https://www.w3.org/2000/01/rdf-schema#label Harmonizome
gptkbp:integratesWith over 100 omics resources
gptkbp:offers API access
data visualization tools
gptkbp:provides searchable and downloadable datasets
gptkbp:releaseYear 2016
gptkbp:type gptkb:protein
gene expression
pathways
gene sets
epigenetic modifications
protein-protein interactions
protein complexes
genetic variants
phenotype associations
protein function
protein modifications
cellular localization
protein domains
drug targets
protein families
disease associations
orthologs
gene-disease associations
functional annotations
protein interactions
chemical associations
disease gene signatures
gene ontology terms
gene-cell type associations
gene-chemical associations
gene-epigenetic associations
gene-gene associations
gene-pathway associations
gene-phenotype associations
gene-protein associations
gene-set associations
gene-tissue associations
gene-variant associations
microRNA targets
protein abundance
protein sets
protein-cell type associations
protein-chemical associations
protein-disease associations
protein-epigenetic associations
protein-gene associations
protein-pathway associations
protein-phenotype associations
protein-set associations
protein-tissue associations
protein-variant associations
tissue specificity
transcription factor targets
gptkbp:url https://amp.pharm.mssm.edu/Harmonizome/
gptkbp:usedFor bioinformatics research
gptkbp:bfsParent gptkb:Avi_Ma'ayan
gptkbp:bfsLayer 7