Statements (22)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:citation |
Kim D, Langmead B, Salzberg SL. HISAT: a fast spliced aligner with low memory requirements. Nat Methods. 2015.
|
| gptkbp:developedBy |
gptkb:Daehwan_Kim
gptkb:Steven_L._Salzberg |
| https://www.w3.org/2000/01/rdf-schema#label |
HISAT
|
| gptkbp:latestReleaseVersion |
2.2.1
|
| gptkbp:license |
gptkb:GPLv3
|
| gptkbp:optimizedFor |
low memory usage
|
| gptkbp:partOf |
bioinformatics pipeline
|
| gptkbp:platform |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:releaseYear |
2015
|
| gptkbp:repository |
https://github.com/DaehwanKimLab/hisat2
|
| gptkbp:successor |
gptkb:TopHat2
|
| gptkbp:supports |
genome alignment
transcriptome alignment |
| gptkbp:usedFor |
spliced alignment
RNA-seq alignment |
| gptkbp:writtenBy |
gptkb:C++
|
| gptkbp:bfsParent |
gptkb:HISAT2
|
| gptkbp:bfsLayer |
7
|