ClinVar

GPTKB entity

Statements (61)
Predicate Object
gptkbp:instanceOf genetic database
gptkbp:acceptsSubmissions yes
gptkbp:access open access
gptkbp:citation Landrum MJ, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D1062-D1067.
gptkbp:country gptkb:United_States
gptkbp:focus human genetic variation
clinical significance
genotype-phenotype relationships
gptkbp:format gptkb:JSON
XML
VCF
tab-delimited
gptkbp:hasClinicalSignificanceCategories other
benign
pathogenic
drug response
likely benign
likely pathogenic
uncertain significance
gptkbp:hasGeneData yes
gptkbp:hasPhenotypeData yes
gptkbp:hasVariantData yes
https://www.w3.org/2000/01/rdf-schema#label ClinVar
gptkbp:language English
gptkbp:launched 2013
gptkbp:license public domain
gptkbp:maintainedBy gptkb:National_Center_for_Biotechnology_Information
gptkbp:partOf gptkb:National_Institutes_of_Health
gptkbp:recognizedBy gptkb:NCBI_database:_clinvar
gptkbp:relatedTo gptkb:GeneReviews
gptkb:OMIM
gptkb:dbSNP
gptkb:dbVar
gptkbp:reviewedBy criteria provided, single submitter
no assertion criteria provided
no assertion provided
practice guideline
reviewed by expert panel
criteria provided, multiple submitters, no conflicts
gptkbp:scope insertions and deletions
single nucleotide variants
structural variants
copy number variations
germline variants
somatic variants
gptkbp:submissionReview curated
gptkbp:supportedBy yes
gptkbp:type phenotype associations
supporting evidence
variant interpretations
gptkbp:updated regularly
gptkbp:usedBy gptkb:researchers
clinicians
genetic counselors
gptkbp:website https://www.ncbi.nlm.nih.gov/clinvar/
gptkbp:YouTubeChannel clinical testing submissions
expert panel submissions
literature only submissions
public submissions
gptkbp:bfsParent gptkb:UCSC_Genome_Browser
gptkbp:bfsLayer 5