ChIA-PET technique

GPTKB entity

Statements (27)
Predicate Object
gptkbp:instanceOf genomic technique
gptkbp:alternativeTo gptkb:5C
gptkb:Hi-C
gptkb:4C
gptkbp:application cancer research
epigenomics
gene regulation studies
gptkbp:developedBy gptkb:Bing_Ren
gptkb:Wei_Li
gptkbp:fullName Chromatin Interaction Analysis by Paired-End Tag sequencing
https://www.w3.org/2000/01/rdf-schema#label ChIA-PET technique
gptkbp:output chromatin interaction maps
gptkbp:publicationYear 2009
gptkbp:publishedIn Cell
gptkbp:relatedTo next-generation sequencing
chromatin immunoprecipitation
3C-based methods
gptkbp:requires paired-end sequencing
DNA ligation
antibody against protein of interest
crosslinking of chromatin
gptkbp:usedFor studying chromatin interactions
identifying protein-mediated chromatin interactions
mapping long-range DNA interactions
gptkbp:website https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2730552/
gptkbp:bfsParent gptkb:ChIA-PET_data
gptkbp:bfsLayer 7