Statements (35)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
chromosome conformation capture technique
|
| gptkbp:analyzes |
genome-wide chromatin contacts
|
| gptkbp:appliesTo |
cancer research
developmental biology epigenomics |
| gptkbp:developedBy |
gptkb:Eric_Lander
gptkb:Job_Dekker |
| gptkbp:enables |
identification of chromatin loops
identification of topologically associating domains identification of chromatin interactions study of nuclear architecture |
| https://www.w3.org/2000/01/rdf-schema#label |
Hi-C
|
| gptkbp:introducedIn |
2009
|
| gptkbp:publishedIn |
gptkb:science
|
| gptkbp:relatedTo |
gptkb:5C
gptkb:chromosome_conformation_capture gptkb:4C 3C |
| gptkbp:resolution |
sequencing depth
|
| gptkbp:supportsProtocol |
sequencing
restriction enzyme digestion biotin labeling crosslinking DNA proximity ligation DNA purification |
| gptkbp:type |
contact matrix
|
| gptkbp:usedBy |
bioinformaticians
genomics researchers molecular biologists |
| gptkbp:usedFor |
studying 3D genome organization
|
| gptkbp:uses |
high-throughput sequencing
|
| gptkbp:bfsParent |
gptkb:DJ_Quik
gptkb:ENCODE gptkb:Suga_Free |
| gptkbp:bfsLayer |
6
|