Statements (36)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
biotechnology method
|
| gptkbp:alternativeTo |
gptkb:Capture-C
gptkb:5C gptkb:Hi-C |
| gptkbp:analyzes |
protein-DNA interactions
DNA looping |
| gptkbp:application |
identifying enhancer-promoter interactions
mapping regulatory networks studying transcription factor binding |
| gptkbp:developedBy |
gptkb:Bing_Ren
gptkb:Wei_Li |
| gptkbp:enables |
genome-wide mapping of chromatin interactions
|
| gptkbp:fullName |
Chromatin Interaction Analysis by Paired-End Tag sequencing
|
| https://www.w3.org/2000/01/rdf-schema#label |
ChIA-PET
|
| gptkbp:publicationYear |
2009
|
| gptkbp:publishedIn |
Cell
|
| gptkbp:relatedTo |
next-generation sequencing
chromatin immunoprecipitation 3C-based methods |
| gptkbp:requires |
paired-end sequencing
ligation of DNA fragments immunoprecipitation antibody against protein of interest crosslinking of chromatin |
| gptkbp:type |
paired-end tag sequences
|
| gptkbp:usedBy |
genomics researchers
molecular biologists |
| gptkbp:usedFor |
studying chromatin interactions
identifying protein-mediated chromatin interactions mapping long-range DNA interactions |
| gptkbp:usedIn |
epigenomics
gene regulation studies |
| gptkbp:bfsParent |
gptkb:Hi-C_experiment
gptkb:chromosome_conformation_capture gptkb:3C_method |
| gptkbp:bfsLayer |
7
|