Cancer Genome Atlas

GPTKB entity

Statements (48)
Predicate Object
gptkbp:instanceOf research
gptkbp:abbreviation gptkb:TCGA
gptkbp:collaboratesWith gptkb:Broad_Institute
gptkb:University_of_North_Carolina_at_Chapel_Hill
gptkb:Washington_University_in_St._Louis
gptkb:Baylor_College_of_Medicine
gptkbp:country gptkb:United_States
gptkbp:database gptkb:Genomic_Data_Commons
gptkbp:dataSource gptkb:Genomic_Data_Commons
open access
gptkbp:endDate 2017
gptkbp:field cancer research
bioinformatics
cancer genomics
gptkbp:fundedBy gptkb:National_Cancer_Institute
gptkb:National_Human_Genome_Research_Institute
gptkbp:goal catalog genetic mutations responsible for cancer
https://www.w3.org/2000/01/rdf-schema#label Cancer Genome Atlas
gptkbp:impact advanced precision medicine
enabled pan-cancer analyses
facilitated biomarker discovery
identified cancer subtypes
provided open-access data
supported drug target identification
gptkbp:legacy established data standards
inspired similar projects
transformed cancer research
gptkbp:notableFor comprehensive cancer datasets
large-scale cancer genomics
multi-omics integration
public data sharing
gptkbp:numberOfCancerTypes 33
gptkbp:numberOfSamples over 11,000
gptkbp:publishedIn gptkb:Comprehensive_molecular_portraits_of_human_breast_tumours_(Nature,_2012)
The Cancer Genome Atlas Pan-Cancer analysis project (Nature Genetics, 2013)
gptkbp:relatedTo gptkb:International_Cancer_Genome_Consortium
gptkb:Human_Cancer_Genome_Project
gptkbp:startYear 2006
gptkbp:status completed
gptkbp:type clinical data
epigenomic data
genomic data
proteomic data
transcriptomic data
gptkbp:website https://www.cancer.gov/about-nci/organization/ccg/research/structural-genomics/tcga
https://www.cancer.gov/tcga
gptkbp:bfsParent gptkb:The_Broad_Institute
gptkbp:bfsLayer 5