BindingDB

GPTKB entity

Statements (49)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:citation Gilson, M.K. et al. Nucleic Acids Research, 2016
Liu, T. et al. Nucleic Acids Research, 2007
gptkbp:compounds over 800,000
gptkbp:documentation https://www.bindingdb.org/bind/Help.jsp
gptkbp:doi 10.1093/nar/gkw928
gptkbp:focusesOn protein-ligand binding affinities
gptkbp:format gptkb:mobile_application
gptkb:SDF
XML
CSV
gptkbp:foundedYear 2000
gptkbp:hasContactEmail [email protected]
gptkbp:hasDownloadPage https://www.bindingdb.org/bind/chemsearch/marvin/SDFdownload.jsp
gptkbp:hasORCID 0000-0002-6656-295X (Michael K. Gilson)
https://www.w3.org/2000/01/rdf-schema#label BindingDB
gptkbp:license free for academic use
gptkbp:maintainedBy gptkb:University_of_California,_San_Diego
gptkb:Skaggs_School_of_Pharmacy_and_Pharmaceutical_Sciences
gptkbp:numberOfInteractions over 2 million
gptkbp:numberOfProteins over 7,000
gptkbp:provides chemical structures
protein sequences
binding affinity data
experimental conditions
protein-small molecule interactions
gptkbp:relatedTo gptkb:UniProt
gptkb:ChEMBL
gptkb:PubChem
gptkb:DrugBank
PDBbind
gptkbp:searchableBy gptkb:chemical_compound
gptkb:protein
gptkb:text
gptkb:InChI
SMILES
PDB ID
UniProt ID
gptkbp:supportedBy yes
gptkbp:supportsDownload yes
gptkbp:type experimental
curated
gptkbp:updated regularly
gptkbp:usedFor computational chemistry
bioinformatics
drug discovery
gptkbp:website https://www.bindingdb.org
gptkbp:bfsParent gptkb:ChEMBL
gptkbp:bfsLayer 6